Hierarchy For Package trans.main

Package Hierarchies:

All Packages

Class Hierarchy

• class java.lang.Object
  • class trans.main.BindingPeak (implements java.io.Serializable)
  • class trans.main.BindingRegionGraphPrinter
  • class trans.main.ChromSet
  • class trans.main.ExportIntervalData
  • class trans.main.FDRVsQValues
  • class trans.main.FDRWindowConverter
  • class trans.main.FindSubBindingRegions
  • class trans.main.IntensityPrinter
  • class trans.main.Interval (implements java.lang.Comparable, java.io.Serializable)
  • class trans.main.IntervalComparator (implements java.util.Comparator)
  • class trans.main.IntervalFilter
  • class trans.main.IntervalGFFPrinter
  • class trans.main.IntervalGraphPrinter
  • class trans.main.IntervalMaker
  • class trans.main.IntervalReportPrinter
  • class trans.main.LoadChipSetIntervalOligoInfo
  • class trans.main.LoadIntervalOligoInfo
  • class trans.main.MakeAllWindows
  • class trans.main.MergeWindowArrays
  • class trans.main.MultiSGRPrinter
  • class trans.main.MultiWindowIntervalMaker
  • class trans.main.Oligo (implements java.io.Serializable)
  • class trans.main.OligoIntensityPrinter
  • class trans.main.OverlapCounter
  • class trans.main.OverlappingWindowScoreExtractor
  • class trans.main.PeakPicker
  • class trans.main.PosRegion (implements java.lang.Comparable)
  • class trans.main.RandomizeLabels
  • class trans.main.ReplaceWindowScores
  • class trans.main.SamChromosomeData
  • class trans.main.ScanChip
  • class trans.main.ScanChromosomes
  • class trans.main.ScanGenes
  • class trans.main.ScoredGene (implements java.lang.Comparable)
  • class trans.main.ScoreIntervals
  • class trans.main.SetNumberIntervalMaker
  • class trans.main.SplitWindowArraysByChromosome
  • class trans.main.SubWindow (implements java.io.Serializable)
  • class trans.main.T2
  • class trans.main.T2Parameter
  • class trans.main.TestScanChip
  • class trans.main.WilcoxonRankSumTest
  • class trans.main.WilcoxonSample (implements java.lang.Comparable)
  • class trans.main.WilcoxonSamplePair (implements java.lang.Comparable)
  • class trans.main.WilcoxonSignedRankTest
  • class trans.main.Window (implements java.lang.Comparable, java.io.Serializable)
  • class trans.main.WindowBlockMaker
  • class trans.main.WindowBlockMakerTwoColor
  • class trans.main.WindowComparator (implements java.util.Comparator)