trans.main
Class MakeAllWindows

java.lang.Object
  trans.main.MakeAllWindows

public class MakeAllWindows

extends java.lang.Object

Makes all windows given oligo positions. Useful for calculating coverage of a genome.

Constructor Summary

MakeAllWindows(java.lang.String[] args)

Method Summary

static void	main(java.lang.String[] args)
void	makeDirectories() Makes directories and files to hold point gr files and tempRatios
static void	printDocs()
void	processArgs(java.lang.String[] args) This method will process each argument and assign new varibles

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

MakeAllWindows

public MakeAllWindows(java.lang.String[] args)

Method Detail

makeDirectories

public void makeDirectories()

Makes directories and files to hold point gr files and tempRatios

main

public static void main(java.lang.String[] args)

processArgs

public void processArgs(java.lang.String[] args)

This method will process each argument and assign new varibles

printDocs

public static void printDocs()