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| Class Summary | |
| AccountManagement | |
| Archive | |
| BlastMatcher | |
| CellType | |
| CellTypeBean | |
| Contact | |
| ContactBean | |
| CronArchive | Emails lab group's collections to superusers. |
| DBUtil | Utility class to hold database relevant methods and fields, some from Hall and Brown The following is a collection of stuff for interacting with a SQL database First open a connection by calling connectMySQL, then get results with executeSQL, then close the connection with closeConnection. |
| DeleteMeNow | |
| Feature | |
| Gene | |
| GeneBean | |
| IdNameMatch | |
| LabGroup | |
| Login | |
| LoginBean | |
| Logout | Logout page, kills session, frees objects |
| Marker | |
| MarkerBean | |
| Organism | |
| OrganismBean | |
| Organization | Container for holding info about Organization membership. |
| PatternMatch | Class to hold information and helper methods relating to pattern matches. |
| Preference | |
| ReagentBean | |
| Search | |
| SearchBean | Bean to hold info about a search request |
| SearchHit | Holds info relating to a search hit from a database LIKE query. |
| Spammer | For sending out email messages |
| TableHeading | |
| UserBean | User information. |
| UserRegistration | |
| UserRegistrationBean | |
| Util | Utility class for BioRoot |
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