Uses of Class
util.bio.wrappers.BL2SeqHit

Packages that use BL2SeqHit

bioroot
util.bio.wrappers	Wrappers for other bio applications.

Uses of BL2SeqHit in bioroot

Methods in bioroot with parameters of type BL2SeqHit

boolean

BlastMatcher.matches(BL2SeqHit[] hits)

Uses of BL2SeqHit in util.bio.wrappers

Methods in util.bio.wrappers that return BL2SeqHit

BL2SeqHit[]	BL2Seq.blastFASTAFiles(java.io.File seq1File, java.io.File seq2File) Uses BLAST bl2seq program to align two sequences found in the seq files, won't work on windows?
BL2SeqHit[]	BL2Seq.parseBl2SeqResults(java.lang.String[] data) This takes an array of BLAST bl2seq results and parses the info into an array
BL2SeqHit[]	BL2Seq.getHits()