trans.bkgrnd
Class MapControlIntensities

java.lang.Object
  trans.bkgrnd.MapControlIntensities

public class MapControlIntensities

extends java.lang.Object

Loads a bpmap file with oligo intensity measurements from multiple '.cel' files after median scaling to 50.

Field Summary

static float

TARGET_MEDIAN

Constructor Summary

MapControlIntensities()

Method Summary

static void	loadIntensities(BackGroundOligo[] oligos, java.io.File[] celFiles)
static void	main(java.lang.String[] args)
static BackGroundOligo[]	makeInitialBGOs(java.io.File bpmap)

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

TARGET_MEDIAN

public static final float TARGET_MEDIAN

See Also:

Constant Field Values

Constructor Detail

MapControlIntensities

public MapControlIntensities()

Method Detail

main

public static void main(java.lang.String[] args)

loadIntensities

public static void loadIntensities(BackGroundOligo[] oligos,
                                   java.io.File[] celFiles)

makeInitialBGOs

public static BackGroundOligo[] makeInitialBGOs(java.io.File bpmap)