Constant Field Values

Contents

• bioroot.*
• com.amazon.*
• trans.bkgrnd.*
• trans.tpmap.*
• util.amazon.*
• util.apps.*
• util.bio.*

bioroot.*

bioroot.Util

public static final java.lang.String	contactEmail	"info@bioroot.org"
public static final int	demoUserId	2
public static final java.lang.String	filepath	"/home/orgbioro/public_html/"
public static final java.lang.String	fullPathToBlast	"/home/orgbioro/public_html/Blast/"
public static final java.lang.String	HTMLPath	"http://bioroot.org/"
public static final java.lang.String	IPPort	"bioroot.org"
public static final int	maxFileSize	250000
public static final java.lang.String	SMTPAccount	"mail.bioroot.org"
public static final java.lang.String	smtpHostName	"mail.bioroot.org"
public static final java.lang.String	smtpPassword	"TGXWJ42R"
public static final java.lang.String	smtpUser	"orgbioro"

bioroot.antibody.AntibodyBase

public static final java.lang.String	antibodyPrepFeatureNames	"Ab Prep Name,Date,Storage Location,Purification,User Comments,Recipients,Last User,Remaining Aliquots,Ab Prep File,Ab Prep Notes,Host Species,"
public static final java.lang.String	useDilutionFeatureNames	"Use,Dilution,Use Dil Notes,"

com.amazon.*

com.amazon.thirdparty.Base64

public static final int	DECODE	0
public static final int	DONT_BREAK_LINES	8
public static final int	ENCODE	1
public static final int	GZIP	2
public static final int	NO_OPTIONS	0

trans.bkgrnd.*

trans.bkgrnd.MapControlIntensities

public static final float

TARGET_MEDIAN

50.0f

trans.tpmap.*

trans.tpmap.IntensityFeature

public static final long

serialVersionUID

1l

trans.tpmap.MapFeature

public static final long

serialVersionUID

3l

trans.tpmap.MummerMapper

public static final java.lang.String

controlChromosomeName

"chrCtrls"

util.amazon.*

util.amazon.S3CodeSamples

public static final java.lang.String	AWS_ACCESS_KEY_PROPERTY_NAME	"0A4PT2HMEBJF9EDSBX82"
public static final java.lang.String	AWS_SECRET_KEY_PROPERTY_NAME	"P4cb3zqbqG0p3xBDaGuhjcPAPIokAkRLrcTeXB3k"
public static final java.lang.String	SAMPLES_PROPERTIES_NAME	"samples.properties"

util.apps.*

util.apps.MakeBioTools

public static final java.lang.String

menuHeader

" Command Line Menus "

util.bio.*

util.bio.wrappers.Primer3Pick

public static final java.lang.String

header

"PRIMER_LEFT_SEQUENCE\tPRIMER_RIGHT_SEQUENCE\tPRIMER_LEFT_TM\tPRIMER_RIGHT_TM\tPRIMER_PRODUCT_SIZE\tSequence\t"