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See:
Description
Class Summary | |
Coordinates | Base class for holding info about a genomic coordinate. |
ExonIntron | ExonIntron info. |
ExportIntergenicRegions | |
ExportIntronicRegions | |
GeneGroup | A GeneGroup is the top organizing level of a "Gene". |
GeneRep | A GeneRep resentation contains a genomic sequence designating a gene broken into various segments. |
GenericFeature | Class to hold user defined gff items like CRMs, enhancers, unpublished single track notation. |
StartEnd | Simple start end object for sorting. |
Transcript | Transcript relevant information, mRNA. |
TransGroup | A TransGroup describes a product derived from a GeneGroup contains one transcript, possibly a translation, and a possibly a set of exons. |
Translation | Translation specific information, protein but referenced with genomic coordinates thus some bits code for protein, some don't physically exist. |
For representing gene annotation.
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