Uses of Package
util.bio.parsers

Packages that use util.bio.parsers
gata.aligner For aligning and post processing DNA sequences using BLAST for subsequent import into GATAPlotter. 
trans.main Principle classes and scripts used in TiMAT2 analysis. 
util.bio.annotation For representing gene annotation. 
util.bio.parsers Parsers and extractors, fasta, quality, text, gff.... 
 

Classes in util.bio.parsers used by gata.aligner
MultiFastaParser
          Extracts sequences and headers out of multi fasta files.
 

Classes in util.bio.parsers used by trans.main
UCSCGeneLine
           
 

Classes in util.bio.parsers used by util.bio.annotation
UCSCGeneLine
           
 

Classes in util.bio.parsers used by util.bio.parsers
UCSCGeneLine