Uses of Class
util.bio.digest.Enzyme

Packages that use Enzyme

bioroot.oligo
bioroot.plasmid
util.bio.digest	Restriction enzyme digestion of DNA sequences.

Uses of Enzyme in bioroot.oligo

Fields in bioroot.oligo declared as Enzyme

static Enzyme[]

OligoBase.ENZYMES

Methods in bioroot.oligo with parameters of type Enzyme

java.lang.String

OligoBean.getRestrictionCutSites(Enzyme[] enzymes)

Uses of Enzyme in bioroot.plasmid

Methods in bioroot.plasmid with parameters of type Enzyme

java.lang.String

PlasmidBean.getRestrictionCutSites(Enzyme[] enzymes)

Uses of Enzyme in util.bio.digest

Methods in util.bio.digest that return Enzyme

static Enzyme[]	REDigest.restrictionMap(java.lang.String DNA, Enzyme[] e) Runs thru an enzyme array attempting to cut a particular sequence
Enzyme[]	NEBParser.makeEnzymeArray(java.lang.String gtype2c, int minLengthRecogSeq)
Enzyme[]	NEBParser.getEnzymes()

Methods in util.bio.digest with parameters of type Enzyme

static java.util.ArrayList	REDigest.restrictionMapHTML(java.lang.String DNA, Enzyme[] e) Returns an arraylist of enzymes found to cut the sequence
static java.lang.String	REDigest.getRestrictionMapString(java.lang.String seq, Enzyme[] enzymes)
static Enzyme[]	REDigest.restrictionMap(java.lang.String DNA, Enzyme[] e) Runs thru an enzyme array attempting to cut a particular sequence
static java.lang.String	REDigest.restrictionMapList(java.lang.String DNA, Enzyme[] e) Restriction map a sequence.