bioroot.antibody
Class AntibodyModify

java.lang.Object
  javax.servlet.GenericServlet
      javax.servlet.http.HttpServlet
          bioroot.antibody.AntibodyModify

All Implemented Interfaces:

java.io.Serializable, javax.servlet.Servlet, javax.servlet.ServletConfig

public class AntibodyModify

extends javax.servlet.http.HttpServlet

Servlet to modify antibodys using antibodyBeans referenced from a Session object.

Author:

nix

See Also:

Serialized Form

Constructor Summary

AntibodyModify()

Method Summary

static java.lang.String	deleteAntibody(AntibodyBean ab, UserBean userBean, DBUtil bioRoot) Attempts to delete an antibody, if sucessful, returns a "" String, otherwise an error message.
void	doGet(javax.servlet.http.HttpServletRequest request, javax.servlet.http.HttpServletResponse response)
void	doPost(javax.servlet.http.HttpServletRequest request, javax.servlet.http.HttpServletResponse response)
static boolean	subtractAndSetAntibodyBeans(AntibodyBean[] beans, javax.servlet.http.HttpSession session) Subtracts a bean from the AntibodyBean[] and resets it in antibodyBeansToEdit
static java.lang.String	updateAntibody(AntibodyBean bean, UserBean userBean, DBUtil bioRoot) Attempts to update a AntibodyBean in the database, only checks that the name is unique if it has changed.
static java.lang.String	updateAntibodyPreps(AntibodyBean bean, DBUtil bioRoot) Attempts to update the AntibodyPreps and UseDilutions in the database.
static boolean	updateCommonAccessFields(AntibodyPrep[] preps, DBUtil bioRoot) Just update the commonly accessible fields in each antibodyPrep as well as the useDilutions.

Methods inherited from class javax.servlet.http.HttpServlet

service

Methods inherited from class javax.servlet.GenericServlet

destroy, getInitParameter, getInitParameterNames, getServletConfig, getServletContext, getServletInfo, getServletName, init, init, log, log

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

AntibodyModify

public AntibodyModify()

Method Detail

doGet

public void doGet(javax.servlet.http.HttpServletRequest request,
                  javax.servlet.http.HttpServletResponse response)
           throws javax.servlet.ServletException,
                  java.io.IOException

Throws:

javax.servlet.ServletException

java.io.IOException

doPost

public void doPost(javax.servlet.http.HttpServletRequest request,
                   javax.servlet.http.HttpServletResponse response)
            throws javax.servlet.ServletException,
                   java.io.IOException

Throws:

javax.servlet.ServletException

java.io.IOException

deleteAntibody

public static java.lang.String deleteAntibody(AntibodyBean ab,
                                              UserBean userBean,
                                              DBUtil bioRoot)

Attempts to delete an antibody, if sucessful, returns a "" String, otherwise an error message. Also deletes the associated antibody preps, use dilutions, strain and plasmid references. All associated files are deleted too. If you change the wording of the error messages, update them in the AntibodySpreadSheet yesDelete section.

updateCommonAccessFields

public static boolean updateCommonAccessFields(AntibodyPrep[] preps,
                                               DBUtil bioRoot)

Just update the commonly accessible fields in each antibodyPrep as well as the useDilutions.

updateAntibodyPreps

public static java.lang.String updateAntibodyPreps(AntibodyBean bean,
                                                   DBUtil bioRoot)

Attempts to update the AntibodyPreps and UseDilutions in the database. If the update is sucessful, the message will be "", otherwise an error message will be returned.

updateAntibody

public static java.lang.String updateAntibody(AntibodyBean bean,
                                              UserBean userBean,
                                              DBUtil bioRoot)

Attempts to update a AntibodyBean in the database, only checks that the name is unique if it has changed. If the update is sucessful, the message will be "", otherwise an error message will be returned.

subtractAndSetAntibodyBeans

public static boolean subtractAndSetAntibodyBeans(AntibodyBean[] beans,
                                                  javax.servlet.http.HttpSession session)

Subtracts a bean from the AntibodyBean[] and resets it in antibodyBeansToEdit