trans.main
Class ExportIntervalData

java.lang.Object
  trans.main.ExportIntervalData

public class ExportIntervalData

extends java.lang.Object

Constructor Summary

ExportIntervalData(java.lang.String[] args)

Method Summary

static java.lang.String	getHeader(int numTreatmentReplicas, int numControlReplicas)
void	loadBestWindowOligoIntensities(Interval interval) Loads the treatment and control intensity arrays for a particular interval.
boolean	loadIntervals(java.io.File intervalFile)
static void	main(java.lang.String[] args)
static void	printDocs()
void	processArgs(java.lang.String[] args) This method will process each argument and assign new varibles

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

ExportIntervalData

public ExportIntervalData(java.lang.String[] args)

Method Detail

getHeader

public static java.lang.String getHeader(int numTreatmentReplicas,
                                         int numControlReplicas)

loadBestWindowOligoIntensities

public void loadBestWindowOligoIntensities(Interval interval)

Loads the treatment and control intensity arrays for a particular interval.

loadIntervals

public boolean loadIntervals(java.io.File intervalFile)

main

public static void main(java.lang.String[] args)

processArgs

public void processArgs(java.lang.String[] args)

This method will process each argument and assign new varibles

printDocs

public static void printDocs()