trans.main
Classes 
BindingPeak
BindingRegionGraphPrinter
ChromSet
ExportIntervalData
FDRVsQValues
FDRWindowConverter
FindSubBindingRegions
IntensityPrinter
Interval
IntervalComparator
IntervalFilter
IntervalGFFPrinter
IntervalGraphPrinter
IntervalMaker
IntervalReportPrinter
LoadChipSetIntervalOligoInfo
LoadIntervalOligoInfo
MakeAllWindows
MergeWindowArrays
MultiSGRPrinter
MultiWindowIntervalMaker
Oligo
OligoIntensityPrinter
OverlapCounter
OverlappingWindowScoreExtractor
PeakPicker
PosRegion
RandomizeLabels
ReplaceWindowScores
SamChromosomeData
ScanChip
ScanChromosomes
ScanGenes
ScoredGene
ScoreIntervals
SetNumberIntervalMaker
SplitWindowArraysByChromosome
SubWindow
T2
T2Parameter
TestScanChip
WilcoxonRankSumTest
WilcoxonSample
WilcoxonSamplePair
WilcoxonSignedRankTest
Window
WindowBlockMaker
WindowBlockMakerTwoColor
WindowComparator