trans.bkgrnd
Class CalculateBackgroundStats

java.lang.Object
  trans.bkgrnd.CalculateBackgroundStats

public class CalculateBackgroundStats

extends java.lang.Object

For each CelMapper converted cel/bpmap files, this calculates a correlation coeff between pm:mm, pm:tm, pm:gc.

Constructor Summary

CalculateBackgroundStats(java.lang.String[] args)

Method Summary

static LoadedOligo[]	fetchLoadedOligos(java.io.File loadedOligoFile)
static void	main(java.lang.String[] args)

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

CalculateBackgroundStats

public CalculateBackgroundStats(java.lang.String[] args)

Method Detail

fetchLoadedOligos

public static LoadedOligo[] fetchLoadedOligos(java.io.File loadedOligoFile)

main

public static void main(java.lang.String[] args)